Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
CESC rs55773007 chr5:96124918 G/A 1.4E-6 299 21.33 24.08 6.73 KM Plot
CESC rs55781197 chr16:67940350 A/G 2.46E-6 296 20.63 28.77 17.15 KM Plot
CESC rs55808803 chr10:81732262 A/T 3.25E-9 297 25.17 16.42 2.62 KM Plot
CESC rs55829132 chr3:129237482 T/C 4.16E-5 297 21.85 20.63 14.73 KM Plot
CESC rs55853150 chr10:135054151 G/A 2.16E-14 293 22.28 16.77 3.33 KM Plot
CESC rs55893842 chr3:129208160 C/G 4.73E-5 295 21.47 20.63 14.73 KM Plot
CESC rs55904629 chr3:129180880 G/A 5.09E-5 293 21.2 20.63 14.73 KM Plot
CESC rs55996659 chr5:96114150 A/G 1.67E-5 297 21.23 24 5.1 KM Plot
CESC rs56047901 chr16:67742326 G/A 5.63E-6 285 21.07 26.27 16.87 KM Plot
CESC rs56070533 chr16:67942320 G/A 2.88E-7 296 20.23 29.57 16.87 KM Plot
CESC rs56119802 chr5:96114072 C/T 1.67E-5 297 21.23 24 5.1 KM Plot
CESC rs56122289 chr10:81746027 G/A 6.38E-8 289 25.37 16.08 2.62 KM Plot
CESC rs56152674 chr3:129211999 G/A 4.73E-5 295 21.47 20.63 14.73 KM Plot
CESC rs56230936 chr3:129208478 C/T 4.73E-5 295 21.47 20.63 14.73 KM Plot
CESC rs56283608 chr3:129169626 C/T 5.42E-5 293 21.2 20.95 14.73 KM Plot